supported by The Human Brain Project
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- Name
- Conexus
- Byline
- Center for Neuroscience, University of California Davis
- Description
- Conexus is a collection of programs for computational neuroanatomy. It currently contains programs for aligning histologically stained sections to microtome block face images and for taking arbitrary slices through 3D volumes made from these images. The long-term goal is to create a 3D atlas containing detailed connectivity information for the thalamus and cortex of macaque monkeys.
- NIfTI-1 support
- Creator
- Issac Trotts, Bruno Olshausen
- Contact
- ijtrotts@ucdavis.edu
- WWW
- http://mallorn.ucdavis.edu/conexus
- Availability
- public
- How to get
- Download it from the Conexus web site.
- Current version
- 0.2
- Current version release date
- August 25, 2004
- Open source
- Yes
- License
- GNU General Public License (GPL)
- Available free of charge
- Yes
- Requirements
- Conexus depends on GTK, GTS, libpng, libjpg, Python, OpenGL, and Open Inventor. Not all of the programs included with Conexus depend on all of these libraries.
- Technical publications
- The only available English documentation is the tutorial: http://mallorn.ucdavis.edu/conexus/tutorial.pdf. The freely available source code describes the inner workings of Conexus.
- Applications publications
- None known.
- Other information
- Keywords
- atlas, HBP supported, registration, segmentation, visualization, volume, warping
- Platforms
- IATR listing last updated
- 03 Sep 2004
This tool is supported wholly or in part by
The Human Brain Project.
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