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Searching for tools supporting NIfTI-1

32 matching tools found

* Entries marked with an asterisk have been added to the Tools Registry by the database maintainers in their desire for completeness. As a result, the listings for these tools should be considered incomplete. We would love to have all entries maintained by software authors and maintainers; please contact us at if you see your work listed here and would like to have an up to date listing.

indicates tools supported by The Human Brain Project.
indicates tools that support NIfTI-1.

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3D Slicer (MIT AI Lab; Surgical Planning Lab, Brigham and Women's Hospital)
Anatomist (Neurospin, I2BM, CEA)
arivis Vision4D (arivis AG, Germany) (arivis AG)
BRAINS (Brain Research: Analysis of Images, Networks, and Systems) (Iowa Mental Helath Clinical Research Center)
BrainVISA (IFR 49 Paris/I2BM CEA)
BrainVoyager (Brain Innovation B.V.)
CARET (Washington University in St. Louis School of Medicine)
DC Harvester* (fMRI Data Center, Dartmouth College)
FreeSurfer (NMR Center, Massachusetts General Hospital)
FSL - The FMRIB Software Library (FMRIB, Oxford University)
Group ICA Toolbox (GIFT and EEGIFT) (The MIND Research Network)
Jim (Xinapse Systems)
LONI Debabeler (The LONI Debabeler manages the conversion of imaging data between multiple file fomats)
LONI De-Identification Debablet (The LONI Debablet de-identifies medical image files.)
LONI ICE (Generates seed points for image processing applications)
LONI Inspector (The LONI Inspector is an application for displaying, searching, comparing, and exporting metadata.)
Mango (Research Imaging Institute, UTHSC San Antonio)
MedINRIA (Asclepios Research Team, INRIA Sophia Antipolis, France)
MINC - core (Medical Image NetCDF)
MIPAV (Medical Image Processing, Analysis and Visualization - NIH)
MIView (
NeuroLens (A.A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital)
Partial Least Squares GUI for PET, fMRI & EEG/MEG (Rotman Res Inst - Baycrest Centre, Univ of Toronto)
PMOD (PMOD Technologies)
SPM5 (Wellcome Department of Imaging Neuroscience, 12 Queen Square, London WC1N 3AR, UK.)
SPM8 (Wellcome Trust Centre for Neuroimaging, UCL Institute of Neurology)
TurtleSeg (MIAL, Simon Fraser University and BiSICL, University of British Columbia)
ViPAR (Image Analysis and Communications Lab (IACL), Johns Hopkins University )
VoxBo (Center for Functional Neuroimaging, University of Pennsylvania)
WFU_BPM (Advanced Neuroscience Imaging Research Core, Wake Forest University Baptist Medical Center )